Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10612 SustainPine v3.0 1464
• AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 0.0
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Putative Complete
sp_v3.0_unigene11788 SustainPine v3.0 1678
• AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 0.0
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamate--ammonia ligase 0.0
Complete
sp_v3.0_unigene73740 SustainPine v3.0 347
• AutoFact: Glutamine synthetase n=2 Tax=Tuber RepID=GLNA_TUBBO 5.00264e-43
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene127862 SustainPine v3.0 1188
• AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 0.0
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamate--ammonia ligase 0.0
C-terminus
sp_v3.0_unigene144502 SustainPine v3.0 878
• AutoFact: glutamine synthetase root isozyme 4 [Zea mays] sp|P38562.1|GLNA4_MAIZE RecName: Full=Glutamine synthetase root isozyme 4; AltName: Full=GS107; AltName: Full=Glutamate--ammonia ligase emb|CAA46722.1| glutamine synthetase [Zea mays] 7.0e-29
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Misassembled
sp_v3.0_unigene147663 SustainPine v3.0 507
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 3.00018e-42
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Putative N-terminus
sp_v3.0_unigene147666 SustainPine v3.0 541
• AutoFact: Glutamine synthetase cytosolic isozyme 1 n=35 Tax=Spermatophyta RepID=GLNA1_VITVI 9.94922e-44
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain