Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4973 SustainPine v3.0 355
AutoFact: heat shock protein [Hevea brasiliensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 5.225e-22
Internal
sp_v3.0_unigene17038 SustainPine v3.0 2109
AutoFact: molecular chaperone Hsp90-2 [Nicotiana benthamiana] 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 3.275e-30
Putative C-terminus
sp_v3.0_unigene17260 SustainPine v3.0 2334
AutoFact: molecular chaperone Hsp90-2 [Nicotiana benthamiana] 0.0
FL-Next: sp=Heat shock protein 90-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Heat shock protein 90 9.80909e-45
Complete
sp_v3.0_unigene21674 SustainPine v3.0 2205
AutoFact: Heat shock protein 81-1 n=55 Tax=Magnoliophyta RepID=HSP81_ORYSJ 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Putative N-terminus
sp_v3.0_unigene21863 SustainPine v3.0 528
AutoFact: Fiber protein Fb9 (Fragment) n=1 Tax=Gossypium barbadense RepID=Q8GT83_GOSBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 1.033e-29
C-terminus
sp_v3.0_unigene31850 SustainPine v3.0 390
AutoFact: Heat shock protein 90A n=2 Tax=Chlamydomonadales RepID=A8J1U1_CHLRE 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 4.56e-32
C-terminus
sp_v3.0_unigene146532 SustainPine v3.0 398
AutoFact: Heat shock protein 90 kDa (Fragment) n=2 Tax=Pseudotsuga RepID=C6F908_PSEMZ 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 3.517e-39
C-terminus
sp_v3.0_unigene146972 SustainPine v3.0 230
AutoFact: Heat shock protein 81-3 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7ML65_ARALL 2.0e-13
FL-Next: sp=Heat shock protein 90-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Heat shock protein 90 6.917e-29
Misassembled
sp_v3.0_unigene152061 SustainPine v3.0 257
AutoFact: Heat shock protein 90 (Fragment) n=1 Tax=Mallomonas rasilis RepID=Q5DK80_9STRA 5.0e-34
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene152448 SustainPine v3.0 515
AutoFact: Heat shock protein 90 (Fragment) n=1 Tax=Physarum polycephalum RepID=A7M6Q2_PHYPO 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene156388 SustainPine v3.0 272
AutoFact: HSP90 family member n=1 Tax=Thalassiosira pseudonana RepID=B8C637_THAPS 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 7.943e-36
Internal
sp_v3.0_unigene156662 SustainPine v3.0 422
AutoFact: Heat shock protein 90A n=2 Tax=Chlamydomonadales RepID=A8J1U1_CHLRE 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 1.329e-29
C-terminus
sp_v3.0_unigene192375 SustainPine v3.0 278
AutoFact: HEAT SHOCK PROTEIN 81-2 [Arabidopsis thaliana] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 1.23e-27
Putative C-terminus
sp_v3.0_unigene203072 SustainPine v3.0 739
AutoFact: Heat Shock Protein 90, cytosolic [Ostreococcus lucimarinus CCE9901] gb|ABO98231.1| Heat Shock Protein 90, cytosolic [Ostreococcus lucimarinus CCE9901] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 90 7.764e-30
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain