Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20538 SustainPine v3.0 633
AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 3.261e-09
Putative N-terminus
sp_v3.0_unigene55117 SustainPine v3.0 335
AutoFact: ATP-dependent RNA helicase DBP5 n=7 Tax=Arthrodermataceae RepID=C5FBW6_ARTOC 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-4A 4.471e-08
Putative C-terminus
sp_v3.0_unigene73635 SustainPine v3.0 522
AutoFact: Eukaryotic initiation factor 4A n=16 Tax=Schizophora RepID=IF4A_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 34 8.394e-08
Internal
sp_v3.0_unigene142174 SustainPine v3.0 230
AutoFact: Eukaryotic initiation factor 4A (ATP-dependent RNA helicase eIF4A) n=1 Tax=Chlorella variabilis RepID=E1ZM95_9CHLO 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic initiation factor 4A-like protein 5.506e-08
Putative N-terminus
sp_v3.0_unigene143072 SustainPine v3.0 201
AutoFact: Eukaryotic initiation factor 4A-3 n=2 Tax=Arabidopsis RepID=IF4A3_ARATH 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 3.817e-09
Internal
sp_v3.0_unigene155574 SustainPine v3.0 341
AutoFact: PREDICTED: eukaryotic translation initiation factor 4A-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC21A 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.736e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain