Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene32540 SustainPine v3.0 618
• AutoFact: PREDICTED: 40S ribosomal protein S18-like isoform 1 n=1 Tax=Nomascus leucogenys RepID=UPI00020AD7D1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene76669 SustainPine v3.0 193
• AutoFact: PREDICTED: similar to ribosomal protein S18e [Tribolium castaneum] gb|EFA04159.1| hypothetical protein TcasGA2_TC014405 [Tribolium castaneum] 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 1.95e-12
N-terminus
sp_v3.0_unigene145053 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S18 n=22 Tax=Embryophyta RepID=RS18_ARATH 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene153591 SustainPine v3.0 503
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Chlorella variabilis RepID=E1Z823_9CHLO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S18 0.0
Putative Complete
sp_v3.0_unigene154310 SustainPine v3.0 308
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SGX8_PARBP 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 4.92e-12
N-terminus
sp_v3.0_unigene154586 SustainPine v3.0 484
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SGX8_PARBP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Putative Complete
sp_v3.0_unigene155714 SustainPine v3.0 356
• AutoFact: 40S ribosomal protein S18, putative n=4 Tax=Chromadorea RepID=A8Q9C4_BRUMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.686e-12
N-terminus
sp_v3.0_unigene161547 SustainPine v3.0 480
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SGX8_PARBP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.45e-12
Putative Complete
sp_v3.0_unigene183051 SustainPine v3.0 740
• AutoFact: 40S ribosomal protein S18 n=9 Tax=sordariomyceta RepID=A4RPY6_MAGO7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene192155 SustainPine v3.0 663
• AutoFact: 40S ribosomal protein rpS18e n=1 Tax=Tetrahymena thermophila RepID=E6PBT6_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.327e-12
Complete
sp_v3.0_unigene206562 SustainPine v3.0 732
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.581e-12
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain