Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17121 SustainPine v3.0 1033
• AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17188 SustainPine v3.0 1043
• AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitosis protein DIM1/U5snRNP-specific component 1.818e-09
Complete
sp_v3.0_unigene23877 SustainPine v3.0 512
• AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitosis protein DIM1/U5snRNP-specific component 1.818e-09
Complete
sp_v3.0_unigene30480 SustainPine v3.0 874
• AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitosis protein DIM1/U5snRNP-specific component 1.818e-09
Complete
sp_v3.0_unigene152362 SustainPine v3.0 278
• AutoFact: PREDICTED: similar to Thioredoxin-like protein 4A n=1 Tax=Hydra magnipapillata RepID=UPI0001925D11 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitosis protein DIM1/U5snRNP-specific component 1.426e-09
C-terminus
sp_v3.0_unigene153461 SustainPine v3.0 373
• AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
N-terminus
sp_v3.0_unigene166029 SustainPine v3.0 393
• AutoFact: Thioredoxin-like U5 snRNP specific pre-mRNA splicing factor, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6RAP6_CRYGW 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitosis protein DIM1/U5snRNP-specific component 1.39e-09
N-terminus
sp_v3.0_unigene166545 SustainPine v3.0 275
• AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitosis protein DIM1/U5snRNP-specific component 1.463e-09
Putative Complete
sp_v3.0_unigene188658 SustainPine v3.0 632
• AutoFact: mitosis protein dim1 [Aedes aegypti] gb|ABF18401.1| U4/U6.U5 snRNP/mitosis protein DIM1 component [Aedes aegypti] gb|EAT42010.1| mitosis protein dim1 [Aedes aegypti] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene202895 SustainPine v3.0 498
• AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitosis protein DIM1/U5snRNP-specific component 1.818e-09
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain