Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter family protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene44131 SustainPine v3.0 441
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 4.00001e-40
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene51974 SustainPine v3.0 233
• AutoFact: ABC transporter n=1 Tax=Daphnia pulex RepID=E9GHP1_DAPPU 2.0e-21
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene57349 SustainPine v3.0 104
• AutoFact: ABC transporter n=1 Tax=Daphnia pulex RepID=E9GHP1_DAPPU 1.0e-08
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene69909 SustainPine v3.0 142
• AutoFact: MDR-like ABC transporter n=6 Tax=Poaceae RepID=Q9LGX1_ORYSJ 3.0e-07
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Chromosome undetermined scaffold_143, whole genome shotgun sequence 3.021e-06
C-terminus
sp_v3.0_unigene78591 SustainPine v3.0 272
• AutoFact: Multidrug resistance protein 1a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BXS4_9EUKA 2.0e-24
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene151321 SustainPine v3.0 424
• AutoFact: ABC transporter, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KNG4_9ALVE 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene154740 SustainPine v3.0 312
• AutoFact: ABC transporter B family protein n=1 Tax=Polysphondylium pallidum RepID=D3BL30_POLPA 1.0e-33
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene160291 SustainPine v3.0 328
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 5.0e-38
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene162498 SustainPine v3.0 430
• AutoFact: ABC transporter B family member 4 n=2 Tax=Arabidopsis RepID=AB4B_ARATH 2.0e-34
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain