Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4610 SustainPine v3.0 674
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
N-terminus
sp_v3.0_unigene76544 SustainPine v3.0 173
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 2.0e-15
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 8.218e-12
Internal
sp_v3.0_unigene78108 SustainPine v3.0 303
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 1.0e-23
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Misassembled
sp_v3.0_unigene146594 SustainPine v3.0 493
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 8.0e-33
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Misassembled
sp_v3.0_unigene159125 SustainPine v3.0 136
• AutoFact: S-adenosylmethionine decarboxylase [Arabidopsis thaliana] ref|NP_001189972.1| S-adenosylmethionine decarboxylase [Arabidopsis thaliana] dbj|BAB01327.1| S-adenosylmethionine decarboxylase [Arabidopsis thaliana] gb|AAT06473.1| At3g25570 [Arabidopsis thalian 2.0e-11
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase proenzyme 7.13e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain