Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1664 SustainPine v3.0 1254
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene19052 SustainPine v3.0 1662
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene78851 SustainPine v3.0 234
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene152400 SustainPine v3.0 334
• AutoFact: [J] COG2016 Predicted RNA-binding protein (contains PUA domain) 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene210304 SustainPine v3.0 922
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain