Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vitamin-b12 independent methionine synthase [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene56403 SustainPine v3.0 312
• AutoFact: Cobalamin-independent methionine synthase MetH/D n=12 Tax=Onygenales RepID=C0NIW4_AJECG 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene62719 SustainPine v3.0 110
• AutoFact: methionine synthase [Carica papaya] 2.0e-08
• FL-Next: tr=Vitamin-b12 independent methionine synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 4.501e-19
Internal
sp_v3.0_unigene69158 SustainPine v3.0 176
• AutoFact: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Mesembryanthemum crystallinum RepID=METE_MESCR 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3.112e-19
C-terminus
sp_v3.0_unigene75283 SustainPine v3.0 304
• AutoFact: methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativa Indica Group] 8.0e-22
• FL-Next: sp=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Solenostemon scutellarioides (Coleus) (Coleus blumei). 0.0
• Sma3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 4.501e-19
Putative C-terminus
sp_v3.0_unigene101514 SustainPine v3.0 634
• AutoFact: Methyltetrahydropteroyltriglutamate#homocysteine methyltransferase (Fragment) n=2 Tax=Magnoliophyta RepID=A6N171_ORYSI 5.0e-29
• FL-Next: tr=Vitamin-b12 independent methionine synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 4.991e-19
C-terminus
sp_v3.0_unigene145294 SustainPine v3.0 1006
• AutoFact: methyltetrahydropteroyltriglutamate#homocysteine methyltransferase [Oryza sativa Indica Group] 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 4.501e-19
Misassembled
sp_v3.0_unigene163621 SustainPine v3.0 420
• AutoFact: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Solenostemon scutellarioides RepID=METE_SOLSC 0.0
• FL-Next: tr=Vitamin-b12 independent methionine synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Cobalamin-independent methionine synthase 9.102e-24
C-terminus
sp_v3.0_unigene202601 SustainPine v3.0 712
• AutoFact: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Solenostemon scutellarioides RepID=METE_SOLSC 2.0e-40
• FL-Next: tr=Vitamin-b12 independent methionine synthase; Pinus pinaster (Maritime pine). 0.0
• Sma3: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 4.991e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain