Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleosome/chromatin assembly factor group, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3531 SustainPine v3.0 1702
AutoFact: Nucleosome assembly protein family n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RDJ7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene24811 SustainPine v3.0 1794
AutoFact: pfam00956, NAP, Nucleosome assembly protein (NAP) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene44826 SustainPine v3.0 1454
AutoFact: nucleosome chromatin assembly protein [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 4.011e-14
Complete
sp_v3.0_unigene79525 SustainPine v3.0 203
AutoFact: Nucleosome/chromatin assembly factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IJV5_POPTR 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene93825 SustainPine v3.0 604
AutoFact: pfam00956, NAP, Nucleosome assembly protein (NAP) 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 4.936e-14
N-terminus
sp_v3.0_unigene106365 SustainPine v3.0 283
AutoFact: nucleosome/chromatin assembly factor A104 [Zea mays] gb|AAK67146.1|AF384036_1 nucleosome/chromatin assembly factor A [Zea mays] gb|ACF84158.1| unknown [Zea mays] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 6.125e-11
Internal
sp_v3.0_unigene164321 SustainPine v3.0 214
AutoFact: Nucleosome/chromatin assembly factor A n=3 Tax=Andropogoneae RepID=Q94F78_MAIZE 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene195046 SustainPine v3.0 241
AutoFact: nucleosome chromatin assembly protein [Oryza sativa Indica Group] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 1.428e-10
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain