Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1874 SustainPine v3.0 3166
• AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
• FL-Next: sp=Probable methionine--tRNA ligase; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chromosome chr5 scaffold_98, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene22297 SustainPine v3.0 3101
• AutoFact: methionyl-tRNA synthetase [Oryza sativa] 0.0
• FL-Next: sp=Probable methionine--tRNA ligase; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Methionyl-tRNA synthetase, putative 5.958e-12
Complete
sp_v3.0_unigene44104 SustainPine v3.0 365
• AutoFact: Methionine-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RWD7_RICCO 1.0e-29
• FL-Next: sp=Probable methionine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Probable methionyl-tRNA synthetase 8.985e-09
N-terminus
sp_v3.0_unigene53049 SustainPine v3.0 390
• AutoFact: methionyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9SVN5.1|SYM_ARATH RecName: Full=Probable methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS emb|CAB36842.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana] emb|C 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable methionyl-tRNA synthetase 8.985e-09
Internal
sp_v3.0_unigene55968 SustainPine v3.0 184
• AutoFact: methionyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9SVN5.1|SYM_ARATH RecName: Full=Probable methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS emb|CAB36842.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana] emb|C 2.0e-15
• FL-Next: sp=Probable methionine--tRNA ligase; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Probable methionyl-tRNA synthetase 8.261e-09
Internal
sp_v3.0_unigene158267 SustainPine v3.0 447
• AutoFact: pfam01588, tRNA_bind, Putative tRNA binding domain 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable methionyl-tRNA synthetase 5.167e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain