Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SIN3 component, histone deacetylase complex [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5054 SustainPine v3.0 3611
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.006e-16
C-terminus
sp_v3.0_unigene55447 SustainPine v3.0 435
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 7.0e-24
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene63700 SustainPine v3.0 260
AutoFact: WRKY domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJF7_MALDO 5.0e-22
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SIN3 component, histone deacetylase complex 2.495e-09
Internal
sp_v3.0_unigene71393 SustainPine v3.0 162
AutoFact: Paired amphipathic helix repeat-containing protein / transcription regulator-related n=1 Tax=Musa acuminata RepID=Q1EPA1_MUSAC 2.0e-09
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 3.215e-09
Internal
sp_v3.0_unigene116356 SustainPine v3.0 271
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 4.0e-08
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SIN3 component, histone deacetylase complex 1.929e-10
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain