Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene29572 SustainPine v3.0 1302
• AutoFact: GTPase Rab1 n=3 Tax=Pinaceae RepID=B0LXL9_9CONI 0.0
• FL-Next: tr=Rab1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Rab1 0.0
Complete
sp_v3.0_unigene30712 SustainPine v3.0 1140
• AutoFact: GTPase Rab1 n=3 Tax=Pinaceae RepID=B0LXL9_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127471 SustainPine v3.0 1067
• AutoFact: PREDICTED: similar to Ras-related protein ORAB-1 n=1 Tax=Ciona intestinalis RepID=UPI0000523C85 1.0e-30
• FL-Next: tr=Rab1; Pinus pinaster (Maritime pine). 0.0
• Sma3: GTP-binding protein 7.73e-13
C-terminus
sp_v3.0_unigene150788 SustainPine v3.0 298
• AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 2.582e-08
Internal
sp_v3.0_unigene155926 SustainPine v3.0 504
• AutoFact: Rab1-like small GTP-binding protein [Petunia x hybrida] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 1.501e-19
C-terminus
sp_v3.0_unigene158305 SustainPine v3.0 246
• AutoFact: GTP-binding protein of the rab family n=9 Tax=Saccharomycetales RepID=A3LRF3_PICST 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 3.395e-11
N-terminus
sp_v3.0_unigene190629 SustainPine v3.0 292
• AutoFact: Ras-related protein Rab-1B n=3 Tax=Dictyosteliida RepID=RAB1B_DICDI 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.506e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain