Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18232 SustainPine v3.0 2153
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AED92689.1| RNA recognition motif-containing 0.0
FL-Next: sp=Polyadenylate-binding protein RBP47B'; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nuclear acid binding protein, putative 1.15e-22
Complete
sp_v3.0_unigene20781 SustainPine v3.0 905
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana] gb|AED92689.1| RNA recognition motif-containing 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear acid binding protein, putative 9.266e-23
Putative N-terminus
sp_v3.0_unigene20973 SustainPine v3.0 827
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear acid binding protein, putative 6.993e-23
C-terminus
sp_v3.0_unigene79983 SustainPine v3.0 161
AutoFact: putative RNA Binding Protein 45 [Oryza sativa Japonica Group] dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133626 SustainPine v3.0 441
AutoFact: putative RNA Binding Protein 45 [Oryza sativa Japonica Group] dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear acid binding protein, putative 6.794e-23
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain