Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1943 SustainPine v3.0 2051
AutoFact: MAR-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar protein nop56, putative 1.106e-11
N-terminus
sp_v3.0_unigene18728 SustainPine v3.0 1865
AutoFact: MAR-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable nucleolar protein 5-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr14 scaffold_54, whole genome shotgun sequence 0.0
N-terminus
sp_v3.0_unigene34821 SustainPine v3.0 1815
AutoFact: MAR-binding protein [Nicotiana tabacum] 0.0
FL-Next: sp=Probable nucleolar protein 5-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar protein nop56, putative 1.366e-11
N-terminus
sp_v3.0_unigene128240 SustainPine v3.0 504
AutoFact: MAR-binding protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBR1_CUCME 1.4013e-45
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar RNA binding protein 5.817e-09
Internal
sp_v3.0_unigene154011 SustainPine v3.0 330
AutoFact: Nucleolar protein NOP5 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NBZ5_PHYIT 0.0
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar protein nop56, putative 1.201e-11
Internal
sp_v3.0_unigene192037 SustainPine v3.0 388
AutoFact: pfam01798, Nop, Putative snoRNA binding domain 1.0e-37
FL-Next: sp=Probable nucleolar protein 5-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nucleolar protein nop56, putative 9.733e-12
Internal
sp_v3.0_unigene206833 SustainPine v3.0 365
AutoFact: MAR-binding protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBR1_CUCME 6.0e-22
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain