Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20987 SustainPine v3.0 2121
AutoFact: Eukaryotic translation initiation factor 3 subunit 6 n=3 Tax=Zea mays RepID=B6TRV3_MAIZE 0.0
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene74057 SustainPine v3.0 430
AutoFact: Eukaryotic initiation factor 3E subunit n=4 Tax=rosids RepID=Q9C5Z3_ARATH 2.0e-38
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative eukaryotic translation initiation factor 3E 2.343e-15
Internal
sp_v3.0_unigene78688 SustainPine v3.0 190
AutoFact: translation initiation factor eIF-3 subunit 6 [Arabidopsis thaliana] gb|AAG53613.1|AF285832_1 eukaryotic initiation factor 3E subunit [Arabidopsis thaliana] gb|AAK64017.1| putative translation initiation factor 3 [Arabidopsis thaliana] gb|AAL85088.1| puta 1.0e-16
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene158069 SustainPine v3.0 453
AutoFact: PREDICTED: eukaryotic translation initiation factor 3, subunit 6 48kDa-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA752 0.0
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain