Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene66 SustainPine v3.0 1123
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 2.312e-08
Complete
sp_v3.0_unigene4673 SustainPine v3.0 2310
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13586 SustainPine v3.0 557
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR20753.1| At1g68180 [Arabidopsis thaliana] gb|AAX22268.1| At1g68180 [Arabidopsis thaliana] gb|AAZ14055.1| At1g68180 [Arabidopsis thaliana] gb|AEE34760.1| RING/U-box domain-containing protein 7.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene14400 SustainPine v3.0 661
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42311.1| unknown protein [Arabidopsis thaliana] dbj|BAD95088.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD93876.1| hypothetical protein [Arabidopsis thaliana] gb|AED91256.1| RING/ 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene108708 SustainPine v3.0 775
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAC01781.1| putative protein [Arabidopsis thaliana] gb|AAL15297.1| AT5g15820/F14F8_200 [Arabidopsis thaliana] gb|AAM47324.1| AT5g15820/F14F8_200 [Arabidopsis thaliana] gb|AED92211.1| RING/U-b 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene129377 SustainPine v3.0 554
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene184269 SustainPine v3.0 1201
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene208579 SustainPine v3.0 408
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 2.141e-07
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain