Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene32444 SustainPine v3.0 1088
• AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4 0.0
Complete
sp_v3.0_unigene60941 SustainPine v3.0 162
• AutoFact: RecName: Full=Eukaryotic translation initiation factor 5A; Short=eIF-5A emb|CAB65463.1| translation initiation factor 5A precursor protein (eIF-5A) [Senecio vernalis] 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4.027e-14
C-terminus
sp_v3.0_unigene76059 SustainPine v3.0 136
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 6.0e-17
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4.418e-28
Internal
sp_v3.0_unigene126869 SustainPine v3.0 1245
• AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 7.71e-28
Misassembled
sp_v3.0_unigene151505 SustainPine v3.0 499
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 4.0e-35
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 2.288e-20
Putative Complete
sp_v3.0_unigene152549 SustainPine v3.0 284
• AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Postia placenta Mad-698-R RepID=B8PCC0_POSPM 3.0e-39
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.006e-28
Putative N-terminus
sp_v3.0_unigene158316 SustainPine v3.0 117
• AutoFact: eIF5A n=2 Tax=Percomorpha RepID=C5HBN1_PAROL 7.0e-13
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 1.956e-28
Internal
sp_v3.0_unigene158568 SustainPine v3.0 282
• AutoFact: eukaryotic translation initiation factor 5A-1 [Danio rerio] gb|AAH67190.1| Eukaryotic translation initiation factor 5A [Danio rerio] gb|AAI52190.1| Eukaryotic translation initiation factor 5A [Danio rerio] gb|AAI59303.1| LOC100135249 protein [Xenopus (Sil 2.0e-19
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative N-terminus
sp_v3.0_unigene191076 SustainPine v3.0 295
• AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Dictyostelium fasciculatum RepID=F4PGG2_9MYCE 4.0e-18
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A-1/2 3.223e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain