Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35326 SustainPine v3.0 687
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 6.971e-17
C-terminus
sp_v3.0_unigene101446 SustainPine v3.0 602
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 4.031e-17
C-terminus
sp_v3.0_unigene105888 SustainPine v3.0 146
• AutoFact: Nodulin family protein, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q10F41_ORYSJ 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 1.738e-17
C-terminus
sp_v3.0_unigene108400 SustainPine v3.0 406
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAC98454.1| nodulin-like protein [Arabidopsis thaliana] gb|AAL14413.1| At2g28120/F24D13.9 [Arabidopsis thaliana] gb|AAL32615.1| nodulin-like protein [Arabidopsis thaliana] gb|AAM13326.1| nodulin-like pro 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 1.188e-09
Putative C-terminus
sp_v3.0_unigene124871 SustainPine v3.0 230
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 2.459e-17
Internal
sp_v3.0_unigene149434 SustainPine v3.0 246
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAC98454.1| nodulin-like protein [Arabidopsis thaliana] gb|AAL14413.1| At2g28120/F24D13.9 [Arabidopsis thaliana] gb|AAL32615.1| nodulin-like protein [Arabidopsis thaliana] gb|AAM13326.1| nodulin-like pro 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 3.006e-09
Putative C-terminus
sp_v3.0_unigene165290 SustainPine v3.0 280
• AutoFact: pfam06813, Nodulin-like, Nodulin-like 1.0e-12
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene166681 SustainPine v3.0 425
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAC98454.1| nodulin-like protein [Arabidopsis thaliana] gb|AAL14413.1| At2g28120/F24D13.9 [Arabidopsis thaliana] gb|AAL32615.1| nodulin-like protein [Arabidopsis thaliana] gb|AAM13326.1| nodulin-like pro 9.0e-11
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 9.758e-11
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain