Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26575 SustainPine v3.0 571
AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene29567 SustainPine v3.0 1337
AutoFact: 60S ribosomal protein L23A n=1 Tax=Fritillaria agrestis RepID=RL23A_FRIAG 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene29660 SustainPine v3.0 1097
AutoFact: 60S ribosomal protein L23A n=1 Tax=Fritillaria agrestis RepID=RL23A_FRIAG 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene56568 SustainPine v3.0 226
AutoFact: RecName: Full=60S ribosomal protein L23a gb|AAK30202.1|AF349961_1 ribosome protein L23a [Daucus carota] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 2.918e-10
Internal
sp_v3.0_unigene127344 SustainPine v3.0 612
AutoFact: 60S ribosomal protein L23A n=1 Tax=Fritillaria agrestis RepID=RL23A_FRIAG 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene151529 SustainPine v3.0 413
AutoFact: Ribosomal protein L23a (Fragment) n=1 Tax=Argopecten irradians RepID=Q8ITB8_AEQIR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene151640 SustainPine v3.0 505
AutoFact: ribosomal protein L23a [Pteris vittata] 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene151873 SustainPine v3.0 262
AutoFact: 60S ribosomal protein L23a n=1 Tax=Daucus carota RepID=RL23A_DAUCA 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 2.918e-10
Putative C-terminus
sp_v3.0_unigene152133 SustainPine v3.0 397
AutoFact: 60S ribosomal protein L23, putative n=1 Tax=Babesia bovis RepID=A7AME1_BABBO 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 1.919e-10
C-terminus
sp_v3.0_unigene152803 SustainPine v3.0 318
AutoFact: PREDICTED: ribosomal protein L23a-like [Bos taurus] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 1.967e-10
C-terminus
sp_v3.0_unigene156617 SustainPine v3.0 344
AutoFact: 60S ribosomal protein n=1 Tax=Aureococcus anophagefferens RepID=F0YN25_9STRA 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene157830 SustainPine v3.0 332
AutoFact: ribosomal protein L25-like protein [Solanum tuberosum] 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 2.195e-10
Putative N-terminus
sp_v3.0_unigene166271 SustainPine v3.0 521
AutoFact: ribosomal protein [Cryptococcus neoformans var. neoformans JEC21] ref|XP_776299.1| hypothetical protein CNBC6880 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21652.1| hypothetical protein CNBC6880 [Cryptococcus neoformans var. neoformans B-3501 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene183538 SustainPine v3.0 526
AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.449e-09
Complete
sp_v3.0_unigene191756 SustainPine v3.0 354
AutoFact: 60S rat ribosomal protein L23 n=2 Tax=Sclerotiniaceae RepID=A6SFR7_BOTFB 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 2.554e-10
C-terminus
sp_v3.0_unigene202821 SustainPine v3.0 516
AutoFact: 60S ribosomal protein L25 n=4 Tax=Pleosporineae RepID=B2VU63_PYRTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 2.642e-10
Complete
sp_v3.0_unigene205572 SustainPine v3.0 505
AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.449e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain