Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene6901 SustainPine v3.0 3756
• AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 8.507e-28
Complete
sp_v3.0_unigene9160 SustainPine v3.0 2807
• AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene41217 SustainPine v3.0 3576
• AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 4.904e-28
Complete
sp_v3.0_unigene76356 SustainPine v3.0 206
• AutoFact: auxin response factor 2 [Oryza sativa] 3.0e-11
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 4.892e-23
Internal
sp_v3.0_unigene94879 SustainPine v3.0 985
• AutoFact: auxin response factor 1 [Arabidopsis thaliana] ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana] sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1 gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana] gb|AAC49 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor 1 3.594e-14
Putative N-terminus
sp_v3.0_unigene141673 SustainPine v3.0 379
• AutoFact: Auxin response factor 1 n=2 Tax=Gossypium RepID=Q3Y6G6_GOSBA 8.0e-14
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor 1 1.37e-10
N-terminus
sp_v3.0_unigene161905 SustainPine v3.0 449
• AutoFact: Auxin response factor 1 n=2 Tax=Gossypium RepID=Q3Y6G6_GOSBA 8.0e-14
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor 1 5.861e-11
N-terminus
sp_v3.0_unigene210246 SustainPine v3.0 535
• AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 3.614e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain