Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: light-harvesting complex II protein Lhcb1 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17243 SustainPine v3.0 1207
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Chlorophyll a/b binding protein 0.0
Complete
sp_v3.0_unigene18433 SustainPine v3.0 1085
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Chlorophyll a/b binding protein 0.0
Complete
sp_v3.0_unigene52111 SustainPine v3.0 453
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: LHCP 1.639e-33
N-terminus
sp_v3.0_unigene78905 SustainPine v3.0 196
AutoFact: Type 1 light-harvesting chlorophyll a/b-binding polypeptide (Fragment) n=1 Tax=Pinus palustris RepID=Q40957_PINPA 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.881e-21
Putative C-terminus
sp_v3.0_unigene146411 SustainPine v3.0 732
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: LHCP 3.606e-31
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain