Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: glycosyl hydrolase family 9 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20766 SustainPine v3.0 579
AutoFact: Endo-1,4-beta-glucanase (Fragment) n=1 Tax=Gossypium hirsutum RepID=O23954_GOSHI 7.0e-12
FL-Next: sp=Endoglucanase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene22254 SustainPine v3.0 1537
AutoFact: pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 0.0
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-beta-1,4-glucanase 7.134e-39
C-terminus
sp_v3.0_unigene26696 SustainPine v3.0 869
AutoFact: endoglucanase 5 [Arabidopsis thaliana] sp|Q9M995.1|GUN5_ARATH RecName: Full=Endoglucanase 5; AltName: Full=Endo-1,4-beta glucanase 5; Flags: Precursor gb|AAF69707.1|AC016041_12 F27J15.28 [Arabidopsis thaliana] gb|AAO22749.1| putative glycosyl hydrolase fa 9.0e-36
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-beta-1,4-glucanase 7.108e-21
C-terminus
sp_v3.0_unigene147655 SustainPine v3.0 1064
AutoFact: Endo-beta-1,4-glucanase n=3 Tax=Spiraeoideae RepID=Q25B23_PRUPE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Endo-beta-1,4-glucanase 3.103e-34
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain