Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: hypothetical protein POPTRDRAFT_797843 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene39275 SustainPine v3.0 396
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 9.484e-17
C-terminus
sp_v3.0_unigene42520 SustainPine v3.0 395
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.792e-12
Putative Complete
sp_v3.0_unigene72120 SustainPine v3.0 319
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.987e-17
Putative C-terminus
sp_v3.0_unigene73067 SustainPine v3.0 210
AutoFact: paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana] sp|Q9SRH9.2|SNL1_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 1 gb|AEE73639.1| paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana] 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.217e-12
Internal
sp_v3.0_unigene95862 SustainPine v3.0 314
AutoFact: Paired amphipathic helix repeat-containing protein / transcription regulator-related n=1 Tax=Musa acuminata RepID=Q1EPA1_MUSAC 2.0e-22
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.474e-17
Internal
sp_v3.0_unigene102207 SustainPine v3.0 297
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 6.0e-11
FL-Next: sp=Paired amphipathic helix protein Sin3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.351e-17
Internal
sp_v3.0_unigene158920 SustainPine v3.0 240
AutoFact: Paired amphipathic helix protein Sin3-like 2 n=3 Tax=Arabidopsis RepID=SNL2_ARATH 2.0e-14
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain