Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21290 SustainPine v3.0 365
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Prunus armeniaca RepID=RS4_PRUAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 8.587e-21
Internal
sp_v3.0_unigene27968 SustainPine v3.0 831
• AutoFact: S4 n=1 Tax=Suberites domuncula RepID=Q4KTD8_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
Complete
sp_v3.0_unigene76543 SustainPine v3.0 301
• AutoFact: Ribosomal family S4e containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CBCC9 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.819e-14
Internal
sp_v3.0_unigene78220 SustainPine v3.0 240
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Postia placenta Mad-698-R RepID=B8P7G3_POSPM 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.61e-20
Internal
sp_v3.0_unigene152152 SustainPine v3.0 211
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Aedes aegypti RepID=Q5QC96_AEDAE 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 7.033e-21
Internal
sp_v3.0_unigene158877 SustainPine v3.0 268
• AutoFact: 40S ribosomal protein S4 n=2 Tax=Tetrahymena thermophila RepID=RS4_TETTH 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene159018 SustainPine v3.0 302
• AutoFact: 40S ribosomal protein S4 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WD75_9STRA 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 6.787e-17
Internal
sp_v3.0_unigene186309 SustainPine v3.0 627
• AutoFact: 40S ribosomal protein S4 n=2 Tax=Ixodoidea RepID=RS4_IXOSC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
C-terminus
sp_v3.0_unigene193208 SustainPine v3.0 413
• AutoFact: PREDICTED: 40S ribosomal protein S4-like isoform 1 [Apis mellifera] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.504e-24
N-terminus
sp_v3.0_unigene199686 SustainPine v3.0 363
• AutoFact: 40S ribosomal protein S4 [Dictyostelium discoideum AX4] sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4 gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum] gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4] 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene200522 SustainPine v3.0 344
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Salmo salar RepID=B5XG61_SALSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain