Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: amino acid permease [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19193 SustainPine v3.0 502
AutoFact: Amino acid permease n=1 Tax=Populus trichocarpa RepID=A9PGQ9_POPTR 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 3.764e-25
N-terminus
sp_v3.0_unigene37240 SustainPine v3.0 1437
AutoFact: Amino acid permease-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z940_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 0.0
Misassembled
sp_v3.0_unigene52487 SustainPine v3.0 441
AutoFact: Amino acid permease n=1 Tax=Populus trichocarpa RepID=A9PGQ9_POPTR 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 0.0
Putative N-terminus
sp_v3.0_unigene53036 SustainPine v3.0 301
AutoFact: amino acid permease [Plantago major] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 4.353e-34
C-terminus
sp_v3.0_unigene53318 SustainPine v3.0 206
AutoFact: Amino acid permease-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z940_PICSI 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 7.855e-18
Internal
sp_v3.0_unigene56391 SustainPine v3.0 434
AutoFact: Amino acid permease n=1 Tax=Populus trichocarpa RepID=A9PGQ9_POPTR 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 1.93e-29
Internal
sp_v3.0_unigene71510 SustainPine v3.0 281
AutoFact: Amino acid permease 3 n=2 Tax=Arabidopsis RepID=AAP3_ARATH 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene73855 SustainPine v3.0 313
AutoFact: amino acid permease [Brassica napus] 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 1.597e-40
Internal
sp_v3.0_unigene107138 SustainPine v3.0 418
AutoFact: amino acid permease [Plantago major] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 0.0
C-terminus
sp_v3.0_unigene165875 SustainPine v3.0 383
AutoFact: amino acid transporter [Pisum sativum] 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene186600 SustainPine v3.0 481
AutoFact: Amino acid permease n=1 Tax=Populus trichocarpa RepID=A9PGQ9_POPTR 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 1.207e-32
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain