Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene49576 SustainPine v3.0 1539
• AutoFact: GDP-mannose 4,6 dehydratase 1 [Arabidopsis thaliana] sp|Q9SNY3.1|GMD1_ARATH RecName: Full=GDP-mannose 4,6 dehydratase 1; AltName: Full=GDP-D-mannose dehydratase 1; Short=GMD 1 gb|AAF07199.1|AF195140_1 GDP-D-mannose 4,6-dehydratase [Arabidopsis thaliana] d 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene55215 SustainPine v3.0 254
• AutoFact: GDP-D-mannose-4, 6-dehydratase (MUR1) [Arabidopsis thaliana] 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene60677 SustainPine v3.0 340
• AutoFact: GDP-mannose 4,6 dehydratase 1 [Arabidopsis thaliana] sp|Q9SNY3.1|GMD1_ARATH RecName: Full=GDP-mannose 4,6 dehydratase 1; AltName: Full=GDP-D-mannose dehydratase 1; Short=GMD 1 gb|AAF07199.1|AF195140_1 GDP-D-mannose 4,6-dehydratase [Arabidopsis thaliana] d 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GDP-mannose 4,6 dehydratase 2 6.985e-09
N-terminus
sp_v3.0_unigene67402 SustainPine v3.0 368
• AutoFact: GDP-mannose 4,6 dehydratase 1 [Arabidopsis thaliana] sp|Q9SNY3.1|GMD1_ARATH RecName: Full=GDP-mannose 4,6 dehydratase 1; AltName: Full=GDP-D-mannose dehydratase 1; Short=GMD 1 gb|AAF07199.1|AF195140_1 GDP-D-mannose 4,6-dehydratase [Arabidopsis thaliana] d 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GDP-mannose 4,6 dehydratase 2 6.904e-09
C-terminus
sp_v3.0_unigene128099 SustainPine v3.0 473
• AutoFact: GDP-mannose 4,6-dehydratase n=1 Tax=Nicotiana benthamiana RepID=B7XH28_NICBE 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GDP-mannose 4,6 dehydratase 2 5.817e-09
C-terminus
sp_v3.0_unigene142688 SustainPine v3.0 172
• AutoFact: GDP-D-mannose-4, 6-dehydratase (MUR1) [Arabidopsis thaliana] 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene156882 SustainPine v3.0 426
• AutoFact: GDP-mannose 4,6-dehydratase n=1 Tax=Polysphondylium pallidum RepID=D3BG72_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gdp-mannose 4,6-dehydratase 1.013e-08
Internal
sp_v3.0_unigene156888 SustainPine v3.0 224
• AutoFact: PREDICTED: similar to gdp mannose-4,6-dehydratase [Nasonia vitripennis] 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gdp-mannose 4,6-dehydratase 9.264e-09
Internal
sp_v3.0_unigene157475 SustainPine v3.0 505
• AutoFact: GDP-D-mannose dehydratase n=2 Tax=Clostridium acetobutylicum RepID=F0K9W5_CLOAE 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gdp-mannose 4,6-dehydratase 8.893e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain