Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17316 SustainPine v3.0 1346
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.721e-14
Complete
sp_v3.0_unigene59563 SustainPine v3.0 381
AutoFact: Elongation factor 1-delta 1 n=4 Tax=Oryza sativa RepID=EF1D1_ORYSJ 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene59986 SustainPine v3.0 279
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene66360 SustainPine v3.0 255
AutoFact: Putative elongation factor 1 beta n=1 Tax=Hordeum vulgare RepID=Q9M3U8_HORVU 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.645e-14
Internal
sp_v3.0_unigene143371 SustainPine v3.0 306
AutoFact: RecName: Full=Elongation factor 1-delta; Short=EF-1-delta; AltName: Full=Elongation factor 1B-beta; AltName: Full=eEF-1B beta gb|AAB68395.1| elongation factor 1-beta [Pimpinella brachycarpa] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 3.493e-15
N-terminus
sp_v3.0_unigene143527 SustainPine v3.0 430
AutoFact: Elongation factor 1-delta 1 n=4 Tax=Oryza sativa RepID=EF1D1_ORYSJ 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 8.728e-09
N-terminus
sp_v3.0_unigene151190 SustainPine v3.0 317
AutoFact: Elongation factor 1-delta n=1 Tax=Anoplopoma fimbria RepID=C3KI18_ANOFI 1.0e-31
FL-Next: tr=Putative elongation factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Elongation factor 1-beta, putative 3.922e-09
Internal
sp_v3.0_unigene154821 SustainPine v3.0 398
AutoFact: similar to GenBank Accession Number AF103726 peptide elongation factor 1-beta in Gallus gallus [Schistosoma japonicum] emb|CAX76775.1| eukaryotic translation elongation factor 1 beta 2 [Schistosoma japonicum] emb|CAX76776.1| eukaryotic translation elongat 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.264e-14
Putative C-terminus
sp_v3.0_unigene154853 SustainPine v3.0 284
AutoFact: similar to GenBank Accession Number AF103726 peptide elongation factor 1-beta in Gallus gallus [Schistosoma japonicum] emb|CAX76775.1| eukaryotic translation elongation factor 1 beta 2 [Schistosoma japonicum] emb|CAX76776.1| eukaryotic translation elongat 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.473e-14
Putative C-terminus
sp_v3.0_unigene158901 SustainPine v3.0 531
AutoFact: Elongation factor 1-beta n=4 Tax=Xenopus RepID=EF1B_XENTR 6.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.22e-14
Internal
sp_v3.0_unigene184346 SustainPine v3.0 458
AutoFact: Elongation factor 1-beta n=4 Tax=Culicini RepID=B8RIZ3_CULTA 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.264e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain