Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thioredoxin h [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene36372 SustainPine v3.0 725
• AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 7.0e-25
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin h 0.0
Putative Complete
sp_v3.0_unigene135671 SustainPine v3.0 292
• AutoFact: Thioredoxin n=2 Tax=Medicago truncatula RepID=A2Q2R1_MEDTR 3.0e-17
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin h 1.156e-12
N-terminus
sp_v3.0_unigene150604 SustainPine v3.0 392
• AutoFact: Thioredoxin n=1 Tax=Candida glabrata CBS 138 RepID=Q6FND5_CANGA 7.0e-23
• FL-Next: sp=Thioredoxin; Ostreococcus lucimarinus (strain CCE9901). 0.0
Complete
sp_v3.0_unigene153773 SustainPine v3.0 431
• AutoFact: Thioredoxin (Fragment) n=2 Tax=Tetraodon nigroviridis RepID=Q4S0R5_TETNG 7.0e-26
• FL-Next: sp=Thioredoxin H-type; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Complete
sp_v3.0_unigene154904 SustainPine v3.0 415
• AutoFact: Thioredoxin (Fragment) n=2 Tax=Tetraodon nigroviridis RepID=Q4S0R5_TETNG 3.0e-25
• FL-Next: sp=Thioredoxin H-type; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Complete
sp_v3.0_unigene155456 SustainPine v3.0 432
• AutoFact: Thioredoxin n=2 Tax=Populus RepID=A9PDI7_POPTR 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene157447 SustainPine v3.0 321
• AutoFact: Thioredoxin n=1 Tax=Xenopus laevis RepID=Q5U566_XENLA 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene158653 SustainPine v3.0 552
• AutoFact: Similar to thioredoxin-like protein, partial n=1 Tax=Ectocarpus siliculosus RepID=D7FW75_ECTSI 3.0e-14
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene202329 SustainPine v3.0 832
• AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 9.0e-25
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin h 0.0
Putative Complete
sp_v3.0_unigene208020 SustainPine v3.0 246
• AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 4.0e-30
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin h 2.062e-14
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain