Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3767 SustainPine v3.0 1635
AutoFact: putative inosine-uridine preferring nucleoside hydrolase, 3'-partial (with alternative splicing) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18295 SustainPine v3.0 783
AutoFact: putative inosine-uridine preferring nucleoside hydrolase (with alternative splicing) [Oryza sativa Japonica Group] gb|AAW34239.1| putative inosine-uridine preferring nucleoside hydrolase [Oryza sativa Japonica Group] gb|ABF96708.1| Inosine-uridine preferr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrimidine-specific ribonucleoside hydrolase rihA 1.232e-08
N-terminus
sp_v3.0_unigene21222 SustainPine v3.0 509
AutoFact: Inosine-uridine preferring nucleoside hydrolase, putative n=1 Tax=Ricinus communis RepID=B9SSZ5_RICCO 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrimidine-specific ribonucleoside hydrolase rihA 1.158e-08
Putative N-terminus
sp_v3.0_unigene59190 SustainPine v3.0 452
AutoFact: putative uridine nucleosidase 2 [Arabidopsis thaliana] sp|Q8LAC4.1|URH2_ARATH RecName: Full=Probable uridine nucleosidase 2; AltName: Full=Uridine ribohydrolase 2 gb|AAM65464.1| unknown [Arabidopsis thaliana] gb|AAN72060.1| expressed protein [Arabidopsis 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrimidine-specific ribonucleoside hydrolase rihA 5.707e-09
N-terminus
sp_v3.0_unigene127153 SustainPine v3.0 1594
AutoFact: putative inosine-uridine preferring nucleoside hydrolase, 3'-partial (with alternative splicing) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127893 SustainPine v3.0 927
AutoFact: pyrimidine-specific ribonucleoside hydrolase riha [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrimidine-specific ribonucleoside hydrolase rihA 1.017e-08
N-terminus
sp_v3.0_unigene141679 SustainPine v3.0 424
AutoFact: putative inosine-uridine preferring nucleoside hydrolase (with alternative splicing) [Oryza sativa Japonica Group] gb|AAW34239.1| putative inosine-uridine preferring nucleoside hydrolase [Oryza sativa Japonica Group] gb|ABF96708.1| Inosine-uridine preferr 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrimidine-specific ribonucleoside hydrolase rihA 1.052e-08
Internal
sp_v3.0_unigene141945 SustainPine v3.0 738
AutoFact: putative uridine nucleosidase 2 [Arabidopsis thaliana] sp|Q8LAC4.1|URH2_ARATH RecName: Full=Probable uridine nucleosidase 2; AltName: Full=Uridine ribohydrolase 2 gb|AAM65464.1| unknown [Arabidopsis thaliana] gb|AAN72060.1| expressed protein [Arabidopsis 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrimidine-specific ribonucleoside hydrolase rihA 8.233e-09
Misassembled
sp_v3.0_unigene165286 SustainPine v3.0 324
AutoFact: putative inosine-uridine preferring nucleoside hydrolase, 3'-partial (with alternative splicing) [Oryza sativa Japonica Group] 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene188693 SustainPine v3.0 307
AutoFact: Probable uridine nucleosidase 2 n=3 Tax=Arabidopsis RepID=URH2_ARATH 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain