Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin remodeling complex subunit [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene15357 SustainPine v3.0 324
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 3.0e-26
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Putative transcriptional regulator 3.114e-08
Internal
sp_v3.0_unigene24692 SustainPine v3.0 1463
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 2.319e-08
C-terminus
sp_v3.0_unigene28601 SustainPine v3.0 342
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene46130 SustainPine v3.0 561
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 3.709e-32
Internal
sp_v3.0_unigene50171 SustainPine v3.0 301
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HJV0_POPTR 4.0e-23
FL-Next: tr=Chromatin remodeling complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromatin remodeling complex subunit 2.045e-06
Internal
sp_v3.0_unigene102773 SustainPine v3.0 562
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWI2/SNF2-like protein 1.397e-14
Internal
sp_v3.0_unigene149022 SustainPine v3.0 246
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 8.0e-30
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative transcriptional regulator 3.249e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain