Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17619 SustainPine v3.0 1238
• AutoFact: vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] ref|NP_974513.1| vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] sp|Q9S9T7.2|VP282_ARATH RecName: Full=Vacuolar protein sorting-associated protein 28 homolog 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene22547 SustainPine v3.0 1167
• AutoFact: vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] ref|NP_974513.1| vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] sp|Q9S9T7.2|VP282_ARATH RecName: Full=Vacuolar protein sorting-associated protein 28 homolog 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34559 SustainPine v3.0 1147
• AutoFact: vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] ref|NP_974513.1| vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] sp|Q9S9T7.2|VP282_ARATH RecName: Full=Vacuolar protein sorting-associated protein 28 homolog 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene65660 SustainPine v3.0 261
• AutoFact: vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] ref|NP_974513.1| vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] sp|Q9S9T7.2|VP282_ARATH RecName: Full=Vacuolar protein sorting-associated protein 28 homolog 2 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94343 SustainPine v3.0 1260
• AutoFact: vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] ref|NP_974513.1| vacuolar protein sorting-associated protein 28-2 [Arabidopsis thaliana] sp|Q9S9T7.2|VP282_ARATH RecName: Full=Vacuolar protein sorting-associated protein 28 homolog 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene150981 SustainPine v3.0 234
• AutoFact: vacuolar protein sorting-associated protein 28-1 [Arabidopsis thaliana] ref|NP_849417.1| vacuolar protein sorting-associated protein 28-1 [Arabidopsis thaliana] ref|NP_974585.1| vacuolar protein sorting-associated protein 28-1 [Arabidopsis thaliana] ref|X 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene153378 SustainPine v3.0 433
• AutoFact: Vacuolar protein sorting-associated protein 28 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C244_9EUKA 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene192973 SustainPine v3.0 441
• AutoFact: Vacuolar protein sorting 28 family protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PUM6_9MYCE 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain