Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: MIKC mads-box transcription factor PTM5 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene16654 SustainPine v3.0 1055
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box transcription factor 8.35e-22
Complete
sp_v3.0_unigene32282 SustainPine v3.0 151
• AutoFact: Putative MADS box transcription factor PrMADS4 n=1 Tax=Pinus radiata RepID=O24488_PINRA 5.0e-16
• FL-Next: tr=Putative MADS box transcription factor PrMADS4; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 1.191e-17
N-terminus
sp_v3.0_unigene37671 SustainPine v3.0 1065
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Putative MADS box transcription factor PrMADS9 0.0
Complete
sp_v3.0_unigene54258 SustainPine v3.0 383
• AutoFact: putative MADS box transcription factor PrMADS8 [Pinus radiata] 0.0
• FL-Next: tr=DAL3 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: AGAMOUS-like protein 3.432e-30
Internal
sp_v3.0_unigene58348 SustainPine v3.0 234
• AutoFact: Putative MADS domain transcription factor GGM1 n=1 Tax=Gnetum gnemon RepID=Q9XGK6_GNEGN 2.0e-23
• FL-Next: tr=DAL3 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: MADS-box protein 3.141e-19
N-terminus
sp_v3.0_unigene98799 SustainPine v3.0 904
• AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 2.503e-14
Putative Complete
sp_v3.0_unigene102274 SustainPine v3.0 909
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Putative MADS box transcription factor PrMADS6 0.0
Complete
sp_v3.0_unigene107303 SustainPine v3.0 667
• AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 4.0e-23
• FL-Next: tr=DAL3 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: MADS-box protein 3.285e-17
Putative N-terminus
sp_v3.0_unigene127216 SustainPine v3.0 1047
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Putative MADS box transcription factor PrMADS6 0.0
Complete
sp_v3.0_unigene128576 SustainPine v3.0 815
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS8; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 8.892e-24
Putative Complete
sp_v3.0_unigene206314 SustainPine v3.0 818
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.041e-19
Putative Complete
sp_v3.0_unigene209112 SustainPine v3.0 300
• AutoFact: Putative MADS box transcription factor PrMADS7 n=1 Tax=Pinus radiata RepID=O24491_PINRA 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box transcription factor 6.341e-20
Putative N-terminus
sp_v3.0_unigene209585 SustainPine v3.0 933
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.041e-19
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain