Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4921 SustainPine v3.0 500
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Os05g0312000 protein 7.31e-06
Internal
sp_v3.0_unigene9647 SustainPine v3.0 436
AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 1.0e-21
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Misassembled
sp_v3.0_unigene10163 SustainPine v3.0 657
AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 3.0e-20
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33B; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene41604 SustainPine v3.0 201
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene53156 SustainPine v3.0 240
AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 2.0e-20
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73673 SustainPine v3.0 471
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76354 SustainPine v3.0 352
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene118700 SustainPine v3.0 352
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene126427 SustainPine v3.0 292
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149423 SustainPine v3.0 134
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene161139 SustainPine v3.0 190
AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 8.0e-07
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain