Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: acyl:coa ligase [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene15266 SustainPine v3.0 660
AutoFact: phenylacetyl-CoA ligase pclA-Penicillium chrysogenum [Penicillium chrysogenum Wisconsin 54-1255] emb|CAA04820.1| phenylacetyl-CoA ligase [Penicillium chrysogenum] emb|CAJ15517.1| phenylacetyl-CoA ligase [Penicillium chrysogenum] emb|CAP98778.1| phenylacet 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene15868 SustainPine v3.0 1989
AutoFact: 4-coumarate--CoA ligase-like 1 [Arabidopsis thaliana] sp|Q9LQ12.1|4CLL1_ARATH RecName: Full=4-coumarate--CoA ligase-like 1; AltName: Full=4-coumarate--CoA ligase isoform 10; Short=At4CL10 gb|AAF75805.1|AC011000_8 Strong similarity to 4-coumarate:CoA ligas 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 9.758e-22
Complete
sp_v3.0_unigene25926 SustainPine v3.0 516
AutoFact: AMP-dependent synthetase and ligase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDT7_RHOM4 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl:coa ligase 3.37e-34
C-terminus
sp_v3.0_unigene76643 SustainPine v3.0 271
AutoFact: Similar to phenylacetyl-CoA ligase n=1 Tax=Leptosphaeria maculans RepID=E5AD00_LEPMC 9.0e-39
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: Coumaryl-coa ligase 2.437e-06
Putative C-terminus
sp_v3.0_unigene80925 SustainPine v3.0 250
AutoFact: phenylacetyl-CoA ligase [Aspergillus fumigatus Af293] gb|EAL91855.2| phenylacetyl-CoA ligase [Aspergillus fumigatus Af293] gb|EDP51487.1| phenylacetyl-CoA ligase [Aspergillus fumigatus A1163] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene127292 SustainPine v3.0 1472
AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GMK1_POPTR 0.0
FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
Sma3: Acyl:coa ligase 1.707e-34
C-terminus
sp_v3.0_unigene143106 SustainPine v3.0 406
AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GMK1_POPTR 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AMP dependent CoA ligase, putative 3.657e-32
Internal
sp_v3.0_unigene146241 SustainPine v3.0 412
AutoFact: 4-coumarate--CoA ligase 2 n=3 Tax=Zea mays RepID=B6TNE1_MAIZE 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165618 SustainPine v3.0 443
AutoFact: 4-coumarate-CoA ligase 2 n=2 Tax=Pyrenophora RepID=B2VTV1_PYRTR 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain