Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene23895 SustainPine v3.0 549
• AutoFact: 50S ribosomal protein L20 n=9 Tax=Poaceae RepID=Q65XC7_ORYSJ 7.0e-27
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L20 7.948e-24
Complete
sp_v3.0_unigene30027 SustainPine v3.0 1044
• AutoFact: 50S ribosomal protein L20 n=1 Tax=Picea sitchensis RepID=A9NPE5_PICSI 0.0
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L20 0.0
Complete
sp_v3.0_unigene61491 SustainPine v3.0 123
• AutoFact: 50S ribosomal protein L20 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U082_9PROT 7.0e-07
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene152427 SustainPine v3.0 432
• AutoFact: 50S ribosomal protein L20 n=1 Tax=Chlorella variabilis RepID=E1ZLL1_9CHLO 8.0e-27
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L20 1.23e-20
Putative Complete
sp_v3.0_unigene153243 SustainPine v3.0 335
• AutoFact: 50S ribosomal protein L20 n=1 Tax=Leadbetterella byssophila DSM 17132 RepID=E4RTL9_LEAB4 2.0e-29
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L20 1.598e-17
N-terminus
sp_v3.0_unigene154817 SustainPine v3.0 336
• AutoFact: 50S ribosomal protein L20 n=1 Tax=Chlorella variabilis RepID=E1ZLL1_9CHLO 2.0e-08
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene190093 SustainPine v3.0 450
• AutoFact: Ribosomal protein L20 [Arabidopsis thaliana] gb|AAM63502.1| ribosomal protein L20, putative [Arabidopsis thaliana] gb|ABD38912.1| At1g16740 [Arabidopsis thaliana] gb|AEE29491.1| Ribosomal protein L20 [Arabidopsis thaliana] 9.0e-21
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L20 8.246e-21
Putative Complete
sp_v3.0_unigene199924 SustainPine v3.0 372
• AutoFact: Ribosomal protein L20 containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q235I3_TETTH 1.0e-27
• FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L20 5.834e-25
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain