Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene53598 SustainPine v3.0 486
AutoFact: glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana] gb|AAU05540.1| At1g12570 [Arabidopsis thaliana] gb|AEE28898.1| glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104601 SustainPine v3.0 470
AutoFact: [E] COG2303 Choline dehydrogenase and related flavoproteins 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-methanol-choline (Gmc) oxidoreductase, putative 6.73e-16
Internal
sp_v3.0_unigene118509 SustainPine v3.0 389
AutoFact: [E] COG2303 Choline dehydrogenase and related flavoproteins 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_376, whole genome shotgun sequence 1.117e-07
Internal
sp_v3.0_unigene131366 SustainPine v3.0 358
AutoFact: Protein HOTHEAD n=1 Tax=Zea mays RepID=B6SW64_MAIZE 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 2.402e-11
Internal
sp_v3.0_unigene138265 SustainPine v3.0 350
AutoFact: glucose-methanol-choline oxidoreductase-like protein [Arabidopsis thaliana] gb|AAD39305.1|AC007576_28 Similar to mandelonitrile lyase [Arabidopsis thaliana] gb|AEE29120.1| glucose-methanol-choline oxidoreductase-like protein [Arabidopsis thaliana] 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-methanol-choline (Gmc) oxidoreductase, putative 1.422e-15
Internal
sp_v3.0_unigene140579 SustainPine v3.0 485
AutoFact: glucose-methanol-choline (GMC) oxidoreductase-like protein [Arabidopsis thaliana] gb|AAD39304.1|AC007576_27 Similar to mandelonitrile lyase [Arabidopsis thaliana] gb|AAL31935.1|AF419603_1 At1g14180/F7A19_27 [Arabidopsis thaliana] gb|AAM91364.1| At1g14180/ 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative mandelonitrile lyase 3.38e-07
Internal
sp_v3.0_unigene142546 SustainPine v3.0 301
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative mandelonitrile lyase 2.541e-07
Internal
sp_v3.0_unigene143439 SustainPine v3.0 432
AutoFact: Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] gb|AAK56275.1|AF367287_1 AT5g51950/MSG15_3 [Arabidopsis thaliana] gb|AAP21162.1| At5g51950/MSG15_3 [Arabidopsis thaliana] gb|AED96149.1| Glucose-methanol-choline (GMC) oxi 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-methanol-choline (Gmc) oxidoreductase, putative 1.352e-15
Internal
sp_v3.0_unigene155299 SustainPine v3.0 397
AutoFact: Putative mandelonitrile lyase (Fragment) n=1 Tax=Lilium longiflorum RepID=B2BA82_LILLO 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein HOTHEAD 1.018e-15
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain