Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: MIKC mads-box transcription factor SOC1 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4424 SustainPine v3.0 891
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 1.935e-17
Putative Complete
sp_v3.0_unigene4481 SustainPine v3.0 868
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 5.939e-30
Complete
sp_v3.0_unigene10189 SustainPine v3.0 542
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 4.312e-21
N-terminus
sp_v3.0_unigene16414 SustainPine v3.0 595
AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 4.585e-15
N-terminus
sp_v3.0_unigene17959 SustainPine v3.0 1006
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box transcription factor 1.86e-21
Complete
sp_v3.0_unigene30653 SustainPine v3.0 884
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 3.055e-19
Complete
sp_v3.0_unigene32645 SustainPine v3.0 877
AutoFact: putative MADS box transcription factor PrMADS5 [Pinus radiata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 4.213e-21
Putative Complete
sp_v3.0_unigene35107 SustainPine v3.0 912
AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 2.458e-15
N-terminus
sp_v3.0_unigene44820 SustainPine v3.0 907
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 3.055e-19
Complete
sp_v3.0_unigene127461 SustainPine v3.0 957
AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene129557 SustainPine v3.0 976
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box transcription factor 2.167e-20
Complete
sp_v3.0_unigene130342 SustainPine v3.0 705
AutoFact: Putative MADS box transcription factor PrMADS4 n=1 Tax=Pinus radiata RepID=O24488_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS4; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box transcription factor 5.612e-26
Putative N-terminus
sp_v3.0_unigene208714 SustainPine v3.0 289
AutoFact: Putative MADS box transcription factor PrMADS4 n=1 Tax=Pinus radiata RepID=O24488_PINRA 1.0e-33
FL-Next: tr=Putative MADS box transcription factor PrMADS8; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Internal
sp_v3.0_unigene209650 SustainPine v3.0 296
AutoFact: putative MADS box transcription factor PrMADS9 [Pinus radiata] 7.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 1.437e-12
N-terminus
sp_v3.0_unigene209729 SustainPine v3.0 496
AutoFact: putative MADS box transcription factor PrMADS9 [Pinus radiata] 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box transcription factor 5.914e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain