Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2485 SustainPine v3.0 3456
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 9.136e-11
Complete
sp_v3.0_unigene34729 SustainPine v3.0 661
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 9.041e-14
C-terminus
sp_v3.0_unigene97175 SustainPine v3.0 522
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 5.0e-14
FL-Next: sp=Protein SPA1-RELATED 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene103704 SustainPine v3.0 388
AutoFact: Protein SPA1-RELATED 4 n=2 Tax=Arabidopsis RepID=SPA4_ARATH 2.0e-26
FL-Next: sp=Protein SPA1-RELATED 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene120678 SustainPine v3.0 269
AutoFact: Ubiquitin ligase protein cop1, putative n=1 Tax=Ricinus communis RepID=B9T5N2_RICCO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 4.548e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain