Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40912 SustainPine v3.0 489
AutoFact: PPR multi-domain protein 8.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 8.959e-14
Putative Complete
sp_v3.0_unigene53164 SustainPine v3.0 359
AutoFact: PPR-repeat protein-like [Oryza sativa Japonica Group] gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group] 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.876e-08
Internal
sp_v3.0_unigene59335 SustainPine v3.0 322
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950 dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AED91470.1| pen 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene63848 SustainPine v3.0 160
AutoFact: PPR-repeat protein-like n=3 Tax=Oryza sativa RepID=Q94E87_ORYSJ 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72671 SustainPine v3.0 297
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750, chloroplastic; Flags: Precursor emb|CAB37460.1| putative protein [Arabidopsis thaliana] emb|CAB 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 9.104e-30
Internal
sp_v3.0_unigene76499 SustainPine v3.0 219
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g42920, chloroplastic; Flags: Precursor gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana] gb|A 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94760 SustainPine v3.0 480
AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 3.96e-06
Internal
sp_v3.0_unigene111390 SustainPine v3.0 168
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580 gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana] gb|AAO42278.1| unknown pro 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene114665 SustainPine v3.0 440
AutoFact: PPR domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 1.68e-12
Internal
sp_v3.0_unigene124967 SustainPine v3.0 310
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.429e-11
N-terminus
sp_v3.0_unigene132955 SustainPine v3.0 489
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 1.707e-07
Internal
sp_v3.0_unigene133176 SustainPine v3.0 475
AutoFact: Putative pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8S263_ORYSJ 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.461e-17
Internal
sp_v3.0_unigene168281 SustainPine v3.0 181
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.968e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain