Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18272 SustainPine v3.0 842
AutoFact: SKP1 n=1 Tax=Pellia endiviifolia (species B) RepID=C9WCK3_9MARC 5.0e-39
FL-Next: sp=SKP1-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Fimbriata-associated protein 1.421e-16
Complete
sp_v3.0_unigene32874 SustainPine v3.0 633
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 6.917e-23
Complete
sp_v3.0_unigene150929 SustainPine v3.0 372
AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 1.076e-23
Internal
sp_v3.0_unigene155074 SustainPine v3.0 409
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 5.445e-24
N-terminus
sp_v3.0_unigene155597 SustainPine v3.0 436
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 9.854e-23
C-terminus
sp_v3.0_unigene165755 SustainPine v3.0 384
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinetochore protein 9.158e-15
Complete
sp_v3.0_unigene166020 SustainPine v3.0 418
AutoFact: SCF ubiquitin ligase n=4 Tax=Agaricomycetes RepID=A8NE72_COPC7 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Skp1, putative 8.301e-11
N-terminus
sp_v3.0_unigene168172 SustainPine v3.0 276
AutoFact: SKP1 n=1 Tax=Pellia endiviifolia (species B) RepID=C9WCK3_9MARC 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 1.077e-13
Internal
sp_v3.0_unigene185988 SustainPine v3.0 545
AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 5.406e-23
Complete
sp_v3.0_unigene188968 SustainPine v3.0 494
AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 7.544e-23
Putative Complete
sp_v3.0_unigene189513 SustainPine v3.0 667
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 8.007e-23
Complete
sp_v3.0_unigene203045 SustainPine v3.0 531
AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 6.642e-23
Complete
sp_v3.0_unigene209336 SustainPine v3.0 574
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 6.598e-23
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain