Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21990 SustainPine v3.0 616
• AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SK21_RICCO 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 2.109e-16
Complete
sp_v3.0_unigene22087 SustainPine v3.0 413
• AutoFact: Putatvie LOB domain protein n=2 Tax=Oryza sativa RepID=Q75L85_ORYSJ 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 4.218e-15
C-terminus
sp_v3.0_unigene30873 SustainPine v3.0 935
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ramosa 2 9.461e-14
Complete
sp_v3.0_unigene32658 SustainPine v3.0 659
• AutoFact: LOB domain protein 1, putative [Solanum demissum] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33799 SustainPine v3.0 689
• AutoFact: LOB domain-containing protein 11 [Arabidopsis thaliana] sp|Q9SK08.2|LBD11_ARATH RecName: Full=LOB domain-containing protein 11; AltName: Full=ASYMMETRIC LEAVES 2-like protein 7; Short=AS2-like protein 7 gb|AEC08131.1| LOB domain-containing protein 11 [Ara 6.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33833 SustainPine v3.0 677
• AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SK21_RICCO 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ramosa 2 1.142e-13
Complete
sp_v3.0_unigene36012 SustainPine v3.0 676
• AutoFact: LOB domain protein 1, putative [Solanum demissum] 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene66861 SustainPine v3.0 372
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 6.211e-20
N-terminus
sp_v3.0_unigene103784 SustainPine v3.0 438
• AutoFact: LOB domain-containing protein 11 [Arabidopsis thaliana] sp|Q9SK08.2|LBD11_ARATH RecName: Full=LOB domain-containing protein 11; AltName: Full=ASYMMETRIC LEAVES 2-like protein 7; Short=AS2-like protein 7 gb|AEC08131.1| LOB domain-containing protein 11 [Ara 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ramosa 2 2.659e-14
C-terminus
sp_v3.0_unigene109742 SustainPine v3.0 378
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LOB domain-containing protein, putative 5.198e-20
Putative N-terminus
sp_v3.0_unigene164690 SustainPine v3.0 393
• AutoFact: LOB domain-containing protein 1 [Arabidopsis thaliana] sp|Q9LQR0.1|LBD1_ARATH RecName: Full=LOB domain-containing protein 1; AltName: Full=ASYMMETRIC LEAVES 2-like protein 8; Short=AS2-like protein 8 gb|AAF75065.1|AC007583_1 F24B9.1 [Arabidopsis thaliana] 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LOB domain-containing protein, putative 2.314e-17
N-terminus
sp_v3.0_unigene166628 SustainPine v3.0 359
• AutoFact: LOB domain-containing protein 1 n=2 Tax=Arabidopsis RepID=LBD1_ARATH 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LOB domain-containing protein 1 7.797e-06
Putative C-terminus
sp_v3.0_unigene206205 SustainPine v3.0 445
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ramosa 2 1.12e-13
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain