Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18060 SustainPine v3.0 868
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23658 SustainPine v3.0 473
AutoFact: ribosomal protein L35 [Branchiostoma belcheri] gb|AAO31777.1| ribosomal protein L35 [Branchiostoma belcheri tsingtauense] 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 1.67e-18
Complete
sp_v3.0_unigene29565 SustainPine v3.0 1485
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37887 SustainPine v3.0 1457
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 1.547e-17
Complete
sp_v3.0_unigene43481 SustainPine v3.0 188
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 1.475e-07
Putative N-terminus
sp_v3.0_unigene126672 SustainPine v3.0 961
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene142336 SustainPine v3.0 786
AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 2.107e-18
Misassembled
sp_v3.0_unigene150599 SustainPine v3.0 396
AutoFact: PREDICTED: ribosomal protein L35-like n=1 Tax=Oryctolagus cuniculus RepID=UPI0001CE183A 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 2.161e-18
Putative Complete
sp_v3.0_unigene153788 SustainPine v3.0 451
AutoFact: 60S ribosomal protein L35 n=2 Tax=Sclerotiniaceae RepID=A6RW74_BOTFB 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 9.831e-19
C-terminus
sp_v3.0_unigene154921 SustainPine v3.0 535
AutoFact: 60S ribosomal protein L35 n=2 Tax=Sclerotiniaceae RepID=A6RW74_BOTFB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 0.0
Putative Complete
sp_v3.0_unigene166085 SustainPine v3.0 379
AutoFact: Ribosomal protein L35, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6QYM4_CRYGW 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 1.626e-18
Putative Complete
sp_v3.0_unigene186306 SustainPine v3.0 473
AutoFact: 60S ribosomal protein L35 [Gallus gallus] sp|Q98TF7.3|RL35_CHICK RecName: Full=60S ribosomal protein L35 dbj|BAB21248.1| ribosomal protein L35 [Gallus gallus] 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 1.67e-18
Putative Complete
sp_v3.0_unigene190551 SustainPine v3.0 544
AutoFact: Ribosomal protein L35, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6QYM4_CRYGW 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene193091 SustainPine v3.0 432
AutoFact: 60S ribosomal protein L35 n=6 Tax=Spermatophyta RepID=B3TLM6_ELAGV 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 1.626e-18
Complete
sp_v3.0_unigene203998 SustainPine v3.0 439
AutoFact: 60S ribosomal protein L35 n=3 Tax=Pleosporineae RepID=B2VQQ5_PYRTR 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L35 1.169e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain