Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene57329 SustainPine v3.0 111
AutoFact: 60S ribosomal protein L18a-1 n=2 Tax=Arabidopsis RepID=A8MRF3_ARATH 1.0e-13
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.911e-13
Internal
sp_v3.0_unigene150233 SustainPine v3.0 410
AutoFact: Ribosomal protein L18a n=1 Tax=Polypedilum vanderplanki RepID=C9K4N1_POLVA 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.543e-13
C-terminus
sp_v3.0_unigene150822 SustainPine v3.0 382
AutoFact: 60S ribosomal protein L18a n=2 Tax=Phytophthora infestans RepID=D0NTC7_PHYIT 2.0e-29
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 5.105e-13
C-terminus
sp_v3.0_unigene150976 SustainPine v3.0 351
AutoFact: PREDICTED: similar to ribosomal protein L18a n=1 Tax=Hydra magnipapillata RepID=UPI00019251F6 5.0e-30
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.261e-13
C-terminus
sp_v3.0_unigene151768 SustainPine v3.0 314
AutoFact: 60S ribosomal protein L18a n=2 Tax=Dictyostelium RepID=RL18A_DICDI 6.0e-23
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L18a 8.698e-08
C-terminus
sp_v3.0_unigene155844 SustainPine v3.0 206
AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D8LL36_ECTSI 9.0e-13
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene192084 SustainPine v3.0 404
AutoFact: Ribosomal L18ae protein family protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150A04D 5.0e-22
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L18a 8.011e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain