Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene375 SustainPine v3.0 1354
• AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene25802 SustainPine v3.0 527
• AutoFact: PREDICTED: 60S ribosomal protein L13 isoform 1 n=1 Tax=Apis mellifera RepID=UPI0000516EED 4.0e-34
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene27403 SustainPine v3.0 737
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Xenopsylla cheopis RepID=A2IAC5_9NEOP 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Putative Complete
sp_v3.0_unigene30833 SustainPine v3.0 713
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Nematostella vectensis RepID=A7S405_NEMVE 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene31143 SustainPine v3.0 602
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Lysiphlebus testaceipes RepID=Q56FE7_LYSTE 4.2039e-45
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene31681 SustainPine v3.0 469
• AutoFact: PREDICTED: 60S ribosomal protein L13 isoform 1 n=1 Tax=Apis mellifera RepID=UPI0000516EED 9.0e-37
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Putative C-terminus
sp_v3.0_unigene32841 SustainPine v3.0 1126
• AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene35906 SustainPine v3.0 631
• AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Putative Complete
sp_v3.0_unigene150499 SustainPine v3.0 263
• AutoFact: 60S ribosomal protein L13 (Fragment) n=1 Tax=Arenicola marina RepID=A8UF36_AREMA 2.0e-15
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 1.955e-23
Internal
sp_v3.0_unigene153484 SustainPine v3.0 399
• AutoFact: 60S ribosomal protein L13 n=2 Tax=Solanum RepID=Q3HRY7_SOLTU 3.0e-26
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Internal
sp_v3.0_unigene154031 SustainPine v3.0 452
• AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 5.99994e-41
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene157397 SustainPine v3.0 395
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Lysiphlebus testaceipes RepID=Q56FE7_LYSTE 1.0e-21
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 3.44397e-41
C-terminus
sp_v3.0_unigene159169 SustainPine v3.0 455
• AutoFact: 60S ribosomal protein L13 n=13 Tax=Poaceae RepID=Q7XJB4_ORYSJ 2.0e-35
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene159318 SustainPine v3.0 570
• AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Putative C-terminus
sp_v3.0_unigene161677 SustainPine v3.0 466
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Volvox carteri f. nagariensis RepID=D8U1M5_VOLCA 2.0e-39
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene188388 SustainPine v3.0 688
• AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene188852 SustainPine v3.0 704
• AutoFact: 60S ribosomal protein L13 n=3 Tax=Formicidae RepID=E2AVP2_9HYME 7.00649e-44
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene188865 SustainPine v3.0 445
• AutoFact: 60S ribosomal protein L13 (Fragment) n=1 Tax=Arenicola marina RepID=A8UF36_AREMA 9.0e-24
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene190753 SustainPine v3.0 639
• AutoFact: 60S ribosomal protein L13 [Ictalurus punctatus] sp|Q90YV5.3|RL13_ICTPU RecName: Full=60S ribosomal protein L13 gb|AAK95139.1|AF401567_1 ribosomal protein L13 [Ictalurus punctatus] gb|ADO29437.1| 60S ribosomal protein l13 [Ictalurus punctatus] 2.0e-37
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene192303 SustainPine v3.0 754
• AutoFact: 60S ribosomal protein L13E [Picea abies] 2.0e-36
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain