Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21868 SustainPine v3.0 568
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=3 Tax=Schizosaccharomyces pombe RepID=IF5A1_SCHPO 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.911e-28
Complete
sp_v3.0_unigene26271 SustainPine v3.0 699
• AutoFact: Translation initiation factor 5A n=1 Tax=Glossina morsitans morsitans RepID=D3TMH0_GLOMM 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.035e-28
Complete
sp_v3.0_unigene31532 SustainPine v3.0 537
• AutoFact: Eukaryotic translation initiation factor 5A n=2 Tax=Caligus RepID=C1BMM4_9MAXI 1.0e-35
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.705e-17
Putative Complete
sp_v3.0_unigene32575 SustainPine v3.0 557
• AutoFact: Eukaryotic translation initiation factor 5A-2 n=14 Tax=Magnoliophyta RepID=IF5A2_SOLLC 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 7.476e-28
Complete
sp_v3.0_unigene150175 SustainPine v3.0 222
• AutoFact: Eukaryotic translation initiation factor eIF-5A n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N3H7_ASPFN 5.0e-22
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A-4 1.069e-08
Internal
sp_v3.0_unigene153507 SustainPine v3.0 399
• AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Dianthus caryophyllus RepID=IF5A_DIACA 7.0e-39
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
N-terminus
sp_v3.0_unigene154878 SustainPine v3.0 447
• AutoFact: Translation initiation factor 5A n=1 Tax=Glossina morsitans morsitans RepID=D3TMH0_GLOMM 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4.491e-28
N-terminus
sp_v3.0_unigene154923 SustainPine v3.0 558
• AutoFact: Eukaryotic translation initiation factor 5A-2, putative n=2 Tax=Onchocercidae RepID=A8QHT7_BRUMA 3.0e-32
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene189938 SustainPine v3.0 252
• AutoFact: GH15450 n=1 Tax=Drosophila grimshawi RepID=B4J2E2_DROGR 2.0e-21
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: eIF-5A-2 7.147e-16
Putative C-terminus
sp_v3.0_unigene201378 SustainPine v3.0 562
• AutoFact: Translation initiation factor eIF-5A, promotes formation of the first peptide bond n=2 Tax=Pichia pastoris RepID=C4R6C4_PICPG 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.371e-28
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain