Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4222 SustainPine v3.0 1459
• AutoFact: LOB domain-containing protein 1 [Arabidopsis thaliana] sp|Q9LQR0.1|LBD1_ARATH RecName: Full=LOB domain-containing protein 1; AltName: Full=ASYMMETRIC LEAVES 2-like protein 8; Short=AS2-like protein 8 gb|AAF75065.1|AC007583_1 F24B9.1 [Arabidopsis thaliana] 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LOB domain-containing protein, putative 7.049e-07
Putative Complete
sp_v3.0_unigene13952 SustainPine v3.0 872
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene14309 SustainPine v3.0 726
• AutoFact: LOB domain protein 1, putative [Solanum demissum] 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 1.811e-14
Complete
sp_v3.0_unigene30442 SustainPine v3.0 709
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 4.853e-16
Complete
sp_v3.0_unigene31984 SustainPine v3.0 468
• AutoFact: LOB domain-containing protein 1 n=2 Tax=Arabidopsis RepID=LBD1_ARATH 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein ASYMMETRIC LEAVES 2 1.546e-11
N-terminus
sp_v3.0_unigene33611 SustainPine v3.0 663
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 2.205e-16
Complete
sp_v3.0_unigene33736 SustainPine v3.0 675
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 1.048e-09
C-terminus
sp_v3.0_unigene36355 SustainPine v3.0 747
• AutoFact: LOB domain protein 1, putative [Solanum demissum] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 3.935e-18
Complete
sp_v3.0_unigene70968 SustainPine v3.0 349
• AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SK21_RICCO 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene94748 SustainPine v3.0 443
• AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SK21_RICCO 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene102536 SustainPine v3.0 654
• AutoFact: LOB domain-containing protein 11 [Arabidopsis thaliana] sp|Q9SK08.2|LBD11_ARATH RecName: Full=LOB domain-containing protein 11; AltName: Full=ASYMMETRIC LEAVES 2-like protein 7; Short=AS2-like protein 7 gb|AEC08131.1| LOB domain-containing protein 11 [Ara 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 9.167e-23
Putative Complete
sp_v3.0_unigene166615 SustainPine v3.0 450
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene207129 SustainPine v3.0 624
• AutoFact: LOB domain protein 1, putative n=1 Tax=Solanum demissum RepID=Q6L463_SOLDE 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LOB domain-containing protein, putative 3.493e-09
Complete
sp_v3.0_unigene209674 SustainPine v3.0 789
• AutoFact: LOB domain protein 1, putative [Solanum demissum] 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain