Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene80524 SustainPine v3.0 280
AutoFact: receptor-like protein kinase HSL1 [Arabidopsis thaliana] sp|Q9SGP2.1|HSL1_ARATH RecName: Full=Receptor-like protein kinase HSL1; AltName: Full=Protein HAESA-LIKE1; Flags: Precursor gb|AAF16764.1|AC010155_17 F3M18.12 [Arabidopsis thaliana] gb|AAM13234.1| p 2.0e-10
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene105498 SustainPine v3.0 311
AutoFact: Leucine-rich repeat receptor-like protein kinase n=3 Tax=Arabidopsis RepID=Q9XGZ2_ARATH 2.0e-22
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 5.585e-09
Internal
sp_v3.0_unigene159925 SustainPine v3.0 481
AutoFact: Protein kinase family protein with leucine-rich repeat domain [Arabidopsis thaliana] gb|AAD40144.1|AF149413_25 contains similarity to protein kinase domains (Pfam F00069, Score=162.6, E=6.8e-45, N=1) and leucien rich repeats (Pfam PF00560, Score=210.7, E= 5.0e-19
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 1.851e-11
Internal
sp_v3.0_unigene165085 SustainPine v3.0 377
AutoFact: Protein kinase [Medicago truncatula] 1.0e-08
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain