Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene67764 SustainPine v3.0 217
AutoFact: F-box/kelch-repeat protein SKIP20 [Arabidopsis thaliana] sp|Q9M1Y1.1|SKI20_ARATH RecName: Full=F-box/kelch-repeat protein SKIP20; AltName: Full=SKP1-interacting partner 20 emb|CAB75813.1| putative protein [Arabidopsis thaliana] gb|AAL67078.1| unknown prot 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kelch repeat-containing F-box-like 1.55e-08
Internal
sp_v3.0_unigene77174 SustainPine v3.0 130
AutoFact: F-box/kelch-repeat protein SKIP20 n=2 Tax=Arabidopsis RepID=SKI20_ARATH 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene97814 SustainPine v3.0 245
AutoFact: F-box/kelch-repeat protein SKIP20 [Arabidopsis thaliana] sp|Q9M1Y1.1|SKI20_ARATH RecName: Full=F-box/kelch-repeat protein SKIP20; AltName: Full=SKP1-interacting partner 20 emb|CAB75813.1| putative protein [Arabidopsis thaliana] gb|AAL67078.1| unknown prot 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene162827 SustainPine v3.0 236
AutoFact: F-box family protein n=1 Tax=Cicer arietinum RepID=E7BSD6_CICAR 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain