Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene454 SustainPine v3.0 1808
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25980 SustainPine v3.0 491
AutoFact: 60S ribosomal protein L4 [Chlamydomonas sp. HS-5] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene31502 SustainPine v3.0 585
AutoFact: 60S ribosomal protein L4, putative n=1 Tax=Ricinus communis RepID=B9SGS2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.433e-16
Internal
sp_v3.0_unigene63219 SustainPine v3.0 247
AutoFact: PREDICTED: similar to ribosomal protein L4 n=1 Tax=Nasonia vitripennis RepID=UPI00015B409C 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 3.703e-12
Internal
sp_v3.0_unigene71264 SustainPine v3.0 387
AutoFact: Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|D Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 5.474e-17
Putative C-terminus
sp_v3.0_unigene152878 SustainPine v3.0 350
AutoFact: Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|D Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene155097 SustainPine v3.0 363
AutoFact: 60S ribosomal protein L4 n=1 Tax=Chlamydomonas sp. HS-5 RepID=Q9XFV3_9CHLO 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 2.931e-12
Internal
sp_v3.0_unigene155721 SustainPine v3.0 229
AutoFact: Ribosomal protein L4 (Fragment) n=1 Tax=Paramecium caudatum RepID=Q95YH2_PARCA 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 3.433e-12
Internal
sp_v3.0_unigene158334 SustainPine v3.0 504
AutoFact: 60S ribosomal protein L4 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KDE5_PUCGT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.382e-16
Internal
sp_v3.0_unigene158760 SustainPine v3.0 354
AutoFact: ribosomal protein L4/L1 family protein [Tetrahymena thermophila] gb|EAR97243.2| ribosomal protein L4/L1 family protein [Tetrahymena thermophila SB210] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.433e-16
Internal
sp_v3.0_unigene159010 SustainPine v3.0 205
AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.046e-16
Internal
sp_v3.0_unigene159223 SustainPine v3.0 205
AutoFact: 60s ribosomal protein L2 [Magnaporthe oryzae 70-15] gb|EDK03676.1| 60s ribosomal protein L2 [Magnaporthe oryzae 70-15] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.286e-16
Internal
sp_v3.0_unigene191283 SustainPine v3.0 446
AutoFact: Component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Volvox carteri f. nagariensis RepID=D8TMT7_VOLCA 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 60S ribosomal protein L1 5.848e-06
C-terminus
sp_v3.0_unigene193166 SustainPine v3.0 401
AutoFact: 60S ribosomal protein L4-B (L1) [Arabidopsis thaliana] 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.433e-16
Internal
sp_v3.0_unigene193293 SustainPine v3.0 570
AutoFact: 60S ribosomal protein L4 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N700_PHYIT 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: L1 1.251e-08
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain